Decoding

Cluster reads, reconstruct oligos, and perform soft-decision decoding to recover the original digital file.

Upload Input & Reference Files

Provide noisy sequencing reads and (optionally) the encoded oligo reference for evaluation and decoding.

Simulated / Sequencing Reads

Upload FASTA/FASTQ reads from Polus simulation or real sequencing.

Please upload a correct file.
Reference Oligos (Encode Output)

Upload the encoded oligo FASTA used as ground truth (optional for decoding, required for evaluation).

Please upload a correct file.
Read Clustering

Group reads belonging to the same oligo before decoding.

Oligo Reconstruction

Optionally build a consensus sequence from multiple reads per oligo.